Transcript: ENSDART00000154793.2 TMEM198-202

Description

transmembrane protein 198ab [Source:ZFIN;Acc:ZDB-GENE-050809-123]

Location

Chromosome 6: 13,779,857-13,852,352 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 1794 variant alleles and maps to 16 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000034685.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000043522.7	TMEM198-201	2947	369aa	ENSDARP00000043521.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QFG9 Q498W5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182899.1	TMEM198-203	1437	369aa	ENSDARP00000155749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QFG9 Q498W5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154793.2	TMEM198-202	635	36aa	ENSDARP00000129208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 635 bps, Translation length: 36 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000154793.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000154793.2 TMEM198-202

Summary

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Transcript: ENSDART00000154793.2 TMEM198-202

Summary

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