Transcript: ENSDART00000154787.3 fxyd6l-203

Description

FXYD domain containing ion transport regulator 6 like [Source:ZFIN;Acc:ZDB-GENE-071205-8]

Location

Chromosome 16: 24,601,755-24,612,874 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 261 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000097057.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155983.3	fxyd6l-205	998	83aa	ENSDARP00000127704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WE12	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154319.3	fxyd6l-202	813	83aa	ENSDARP00000128463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WE12	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167121.2	fxyd6l-208	691	50aa	ENSDARP00000131393.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000163305.2	fxyd6l-207	591	50aa	ENSDARP00000137971.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000155614.3	fxyd6l-204	396	62aa	ENSDARP00000128932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000154787.3	fxyd6l-203	376	56aa	ENSDARP00000128078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000156519.3	fxyd6l-206	360	42aa	ENSDARP00000127694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153987.2	fxyd6l-201	320	33aa	ENSDARP00000127812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 376 bps, Translation length: 56 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000154787.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000154787.3 fxyd6l-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000154787.3 fxyd6l-203

Summary

About Us

Get help

Our sister sites

Follow us