Transcript: ENSDART00000154614.2 nfyba-202

Description

nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]

Gene Synonyms

zgc:110552

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 201 variant alleles and maps to 38 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057254.7	nfyba-201	1122	204aa	ENSDARP00000057253.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q561X4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168558.2	nfyba-203	629	204aa	ENSDARP00000138536.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q561X4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154614.2	nfyba-202	349	106aa	ENSDARP00000128248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 349 bps, Translation length: 106 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000154614.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.