Transcript: ENSDART00000154580.2 dnajc27-202

Description

DnaJ (Hsp40) homolog, subfamily C, member 27 [Source:ZFIN;Acc:ZDB-GENE-081022-93]

Gene Synonyms

rbj, zgc:194263, zgc:194279

Location

About this transcript

This transcript has 7 exons, is annotated with 30 domains and features, is associated with 556 variant alleles and maps to 161 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154580.2	dnajc27-202	909	273aa	ENSDARP00000127972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DHR2 Q6IMK3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000123114.3	dnajc27-201	5971	273aa	ENSDARP00000109834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCB8	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 909 bps, Translation length: 273 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6IMK3

Version

ENSDART00000154580.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.