Transcript: ENSDART00000154568.2 hs2st1b-202

Description

heparan sulfate 2-O-sulfotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-100304-1]

Gene Synonyms

si:dkey-18d1.2

Location

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 399 variant alleles and maps to 113 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089121.6	hs2st1b-201	1455	356aa	ENSDARP00000083554.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QLG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154568.2	hs2st1b-202	972	211aa	ENSDARP00000129211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000157181.2	hs2st1b-203	430	140aa	ENSDARP00000129683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 972 bps, Translation length: 211 residues

Version

ENSDART00000154568.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.