Transcript: ENSDART00000154556.3 msh5-202

Description

mutS homolog 5 [Source:ZFIN;Acc:ZDB-GENE-131127-632]

Gene Synonyms

si:ch73-156o22.1

Location

About this transcript

This transcript has 23 exons, is annotated with 21 domains and features, is associated with 1040 variant alleles and maps to 107 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000154556.3	msh5-202	2597	789aa	ENSDARP00000129461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192481.1	msh5-203	3485	516aa	ENSDARP00000157431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000114836.4	msh5-201	3336	572aa	ENSDARP00000097595.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 2,597 bps, Translation length: 789 residues

Version

ENSDART00000154556.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]