Transcript: ENSDART00000154503.3 syncripl-202

Description

synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]

Gene Synonyms

wu:fc27c07, zgc:55901

Location

About this transcript

This transcript has 12 exons, is annotated with 28 domains and features, is associated with 733 variant alleles and maps to 230 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154503.3	syncripl-202	2415	560aa	ENSDARP00000127882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NYJ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154467.2	syncripl-201	811	184aa	ENSDARP00000129514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WH05	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,415 bps, Translation length: 560 residues

Version

ENSDART00000154503.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.