Transcript: ENSDART00000154501.3 cntnap1-202

Description

contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]

Gene Synonyms

caspr1, si:ch211-250i3.4, zmp:0000000749

Location

About this transcript

This transcript has 24 exons, is annotated with 56 domains and features, is associated with 768 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154501.3	cntnap1-202	4033	1309aa	ENSDARP00000129322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WGG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000111981.4	cntnap1-201	3894	1297aa	ENSDARP00000097939.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPX5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188470.1	cntnap1-203	2166	721aa	ENSDARP00000156367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QP42	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 4,033 bps, Translation length: 1,309 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000154501.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.