Transcript: ENSDART00000154499.2 si:dkey-206p8.1-201

Description

si:dkey-206p8.1 [Source:ZFIN;Acc:ZDB-GENE-131127-460]

Location

About this transcript

This transcript has 5 exons, is associated with 643 variant alleles and maps to 2 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000157079.2	si:dkey-206p8.1-202	1047	234aa	ENSDARP00000128158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WD61	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154499.2	si:dkey-206p8.1-201	704	53aa	ENSDARP00000129481.1	Nonsense mediated decay	X1WGX2	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 704 bps, Translation length: 53 residues

Version

ENSDART00000154499.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.