Transcript: ENSDART00000154476.3 COL4A4-201

Description

collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]

Location

About this transcript

This transcript has 48 exons, is annotated with 79 domains and features, is associated with 1221 variant alleles and maps to 295 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154476.3	COL4A4-201	10607	1670aa	ENSDARP00000129072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WFR7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186765.1	COL4A4-202	723	235aa	ENSDARP00000156735.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 48, Coding exons: 47, Transcript length: 10,607 bps, Translation length: 1,670 residues

Version

ENSDART00000154476.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]