Transcript: ENSDART00000154434.3 frmd4ba-202

Description

FERM domain containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-130412-1]

Gene Synonyms

fb59f02, si:dkey-178o16.1, wu:fb59f02

Location

Chromosome 6: 43,250,965-43,387,920 reverse strand.

About this transcript

This transcript has 24 exons, is annotated with 42 domains and features, is associated with 1898 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000074599.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000154434.3	frmd4ba-202	4516	962aa	ENSDARP00000127557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180990.1	frmd4ba-206	6515	693aa	ENSDARP00000149510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000186022.1	frmd4ba-207	6311	781aa	ENSDARP00000151295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000156267.2	frmd4ba-205	912	129aa	ENSDARP00000129083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000191955.1	frmd4ba-208	159	53aa	ENSDARP00000154329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000155080.2	frmd4ba-203	218	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000154170.2	frmd4ba-201	909	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000155601.2	frmd4ba-204	418	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 24, Coding exons: 22, Transcript length: 4,516 bps, Translation length: 962 residues

Version

ENSDART00000154434.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000154434.3 frmd4ba-202

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Transcript: ENSDART00000154434.3 frmd4ba-202

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