Transcript: ENSDART00000154398.2 kdm6al-202

Description

lysine (K)-specific demethylase 6A, like [Source:ZFIN;Acc:ZDB-GENE-070112-2002]

Location

About this transcript

This transcript has 2 exons, is associated with 178 variant alleles and maps to 4 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000083499.6	kdm6al-201	4921	1311aa	ENSDARP00000077934.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1S9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157266.3	kdm6al-203	5865	303aa	ENSDARP00000128411.1	Nonsense mediated decay	-	-
ENSDART00000154398.2	kdm6al-202	208	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 208 bps,

Version

ENSDART00000154398.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.