Transcript: ENSDART00000154376.3 CYP11A1-201

Description

cytochrome P450 family 11 subfamily A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]

Location

Chromosome 25: 22,319,958-22,326,589 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 303 variant alleles and maps to 178 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000002347.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000024866.10	CYP11A1-204	2185	509aa	ENSDARP00000025030.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SYJ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000073566.5	CYP11A1-205	2235	509aa	ENSDARP00000068056.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SYJ6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154376.3	CYP11A1-201	884	266aa	ENSDARP00000129542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153492.3	CYP11A1-203	833	245aa	ENSDARP00000127507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000154065.3	CYP11A1-202	776	235aa	ENSDARP00000129033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 884 bps, Translation length: 266 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000154376.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000154376.3 CYP11A1-201

Summary

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Transcript: ENSDART00000154376.3 CYP11A1-201

Summary

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