Transcript: ENSDART00000154333.2 camkva-201

Description

CaM kinase-like vesicle-associated a [Source:ZFIN;Acc:ZDB-GENE-100819-2]

Location

About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 10 variant alleles and maps to 91 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000179964.1	camkva-202	1230	409aa	ENSDARP00000153285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QEH8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000154333.2	camkva-201	2818	386aa	ENSDARP00000127692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FE74	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,818 bps, Translation length: 386 residues

Version

ENSDART00000154333.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.