Transcript: ENSDART00000154275.3 clmn-201

Description

calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]

Gene Synonyms

si:ch211-196p2.2

Location

About this transcript

This transcript has 12 exons, is annotated with 40 domains and features, is associated with 1639 variant alleles and maps to 115 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154275.3	clmn-201	3468	1052aa	ENSDARP00000127965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WCM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000190806.1	clmn-202	300	99aa	ENSDARP00000155530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RXS1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,468 bps, Translation length: 1,052 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000154275.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.