Transcript: ENSDART00000154175.2 taf15-202

Description

TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]

Location

Chromosome 15: 1,831,164-1,843,839 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 11 variant alleles and maps to 68 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000070019.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102410.5	taf15-201	2083	434aa	ENSDARP00000093187.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1A5X7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156718.3	taf15-206	913	271aa	ENSDARP00000127709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000154175.2	taf15-202	694	231aa	ENSDARP00000129551.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000154369.3	taf15-203	640	213aa	ENSDARP00000129847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000156283.2	taf15-205	404	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000155779.2	taf15-204	890	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 694 bps, Translation length: 231 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000154175.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000154175.2 taf15-202

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Transcript: ENSDART00000154175.2 taf15-202

Summary

About Us

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