Transcript: ENSDART00000154107.2 si:ch211-178n15.1-201

Description

si:ch211-178n15.1 [Source:ZFIN;Acc:ZDB-GENE-131121-24]

Location

About this transcript

This transcript has 3 exons, is associated with 819 variant alleles and maps to 2 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154701.3	si:ch211-178n15.1-202	7783	407aa	ENSDARP00000129813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WHU9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154107.2	si:ch211-178n15.1-201	2299	406aa	ENSDARP00000129628.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,299 bps, Translation length: 406 residues

Version

ENSDART00000154107.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]