Transcript: ENSDART00000154073.2 gramd1c-201

Description

GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]

Gene Synonyms

fe11c03, im:6904950, si:ch73-93k15.2, wu:fe11c03

Location

Chromosome 24: 21,137,175-21,139,396 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 353 variant alleles and maps to 42 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000076238.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000193256.1	gramd1c-204	4507	692aa	ENSDARP00000146528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F236	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154249.2	gramd1c-202	3328	692aa	ENSDARP00000129043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F236	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155652.2	gramd1c-203	885	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000154073.2	gramd1c-201	480	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 480 bps,

Version

ENSDART00000154073.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000154073.2 gramd1c-201

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Transcript: ENSDART00000154073.2 gramd1c-201

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