Transcript: ENSDART00000154039.2 cntnap2a-201

Description

contactin associated protein 2a [Source:ZFIN;Acc:ZDB-GENE-120328-3]

Gene Synonyms

zmp:0000000672

Location

Chromosome 24: 17,421,429-17,892,325 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 52 domains and features, is associated with 9380 variant alleles and maps to 207 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000058969.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155843.3	cntnap2a-202	1491	190aa	ENSDARP00000128907.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000185619.1	cntnap2a-204	8525	1311aa	ENSDARP00000154768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000178326.2	cntnap2a-203	8495	1301aa	ENSDARP00000143321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000154039.2	cntnap2a-201	4147	1284aa	ENSDARP00000128341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000186112.1	cntnap2a-205	3951	1316aa	ENSDARP00000146773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L7NKH5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,147 bps, Translation length: 1,284 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000154039.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000154039.2 cntnap2a-201

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Transcript: ENSDART00000154039.2 cntnap2a-201

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