Transcript: ENSDART00000154009.3 thop1-203

Description

thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]

Gene Synonyms

fb74b01, wu:fb74b01, zgc:92139

Location

Chromosome 11: 7,183,072-7,194,753 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 531 variant alleles and maps to 35 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000013776.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000046670.9	thop1-201	2365	686aa	ENSDARP00000046669.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHR6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000125619.4	thop1-202	2124	707aa	ENSDARP00000109333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EZ90	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000156974.2	thop1-204	954	302aa	ENSDARP00000129723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WHL0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000154009.3	thop1-203	589	176aa	ENSDARP00000128894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WF90	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 589 bps, Translation length: 176 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000154009.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000154009.3 thop1-203

Summary

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Transcript: ENSDART00000154009.3 thop1-203

Summary

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