Transcript: ENSDART00000154009.3 THOP1-201

Description

thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]

Location

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 531 variant alleles and maps to 35 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000046670.9	THOP1-203	2365	686aa	ENSDARP00000046669.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHR6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125619.4	THOP1-204	2124	707aa	ENSDARP00000109333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EZ90	-
ENSDART00000156974.2	THOP1-202	954	302aa	ENSDARP00000129723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000154009.3	THOP1-201	589	176aa	ENSDARP00000128894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 589 bps, Translation length: 176 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000154009.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.