Transcript: ENSDART00000153980.2 PARVB-203

Description

parvin, beta [Source:ZFIN;Acc:ZDB-GENE-030131-4411]

Location

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 388 variant alleles and maps to 48 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011751.9	PARVB-201	1566	365aa	ENSDARP00000012119.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC42	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153980.2	PARVB-203	855	258aa	ENSDARP00000129149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000154700.3	PARVB-202	668	176aa	ENSDARP00000127883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 855 bps, Translation length: 258 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000153980.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.