Transcript: ENSDART00000153922.2 si:ch211-202f3.3-202

Description

si:ch211-202f3.3 [Source:ZFIN;Acc:ZDB-GENE-080917-19]

Location

About this transcript

This transcript has 5 exons, is associated with 342 variant alleles and maps to 27 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000074854.3	si:ch211-202f3.3-201	2344	736aa	ENSDARP00000069340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000153922.2	si:ch211-202f3.3-202	863	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000154718.2	si:ch211-202f3.3-203	830	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 863 bps,

Version

ENSDART00000153922.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.