Transcript: ENSDART00000153860.2 jmjd7-202

Description

jumonji domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050417-86]

Gene Synonyms

zgc:110265

Location

About this transcript

This transcript has 8 exons, is associated with 5 variant alleles and maps to 75 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000051526.6	jmjd7-201	1234	311aa	ENSDARP00000051525.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R3W9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153860.2	jmjd7-202	929	188aa	ENSDARP00000127757.1	Nonsense mediated decay	X1WC15	-

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 929 bps, Translation length: 188 residues

Version

ENSDART00000153860.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.