Transcript: ENSDART00000153848.2 phldb1b-202

Description

pleckstrin homology-like domain, family B, member 1b [Source:ZFIN;Acc:ZDB-GENE-121114-8]

Location

Chromosome 15: 17,969,990-18,091,157 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 2359 variant alleles and maps to 23 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000079378.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000113142.5	phldb1b-201	5369	1443aa	ENSDARP00000103138.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155898.3	phldb1b-205	801	211aa	ENSDARP00000127529.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000153848.2	phldb1b-202	774	258aa	ENSDARP00000129133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000155194.2	phldb1b-204	739	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000154524.2	phldb1b-203	693	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 774 bps, Translation length: 258 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000153848.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENSDART00000153848.2 phldb1b-202

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Transcript: ENSDART00000153848.2 phldb1b-202

Summary

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