Transcript: ENSDART00000153818.3 srsf3a-205

Description

serine and arginine rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]

Location

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 215 variant alleles and maps to 129 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153818.3	srsf3a-205	806	174aa	ENSDARP00000128223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q801U3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000154963.3	srsf3a-206	889	135aa	ENSDARP00000127936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 806 bps, Translation length: 174 residues

Version

ENSDART00000153818.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.