Transcript: ENSDART00000153791.3 dchs1a-201

Description

dachsous cadherin-related 1a [Source:ZFIN;Acc:ZDB-GENE-120410-3]

Location

About this transcript

This transcript has 21 exons, is annotated with 199 domains and features, is associated with 3477 variant alleles and maps to 245 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153791.3	dchs1a-201	12286	3275aa	ENSDARP00000128412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDW2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184027.1	dchs1a-202	9970	3275aa	ENSDARP00000145870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDW2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 12,286 bps, Translation length: 3,275 residues

Version

ENSDART00000153791.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]