Transcript: ENSDART00000153783.2 si:dkey-7j14.5-201

Description

si:dkey-7j14.5 [Source:ZFIN;Acc:ZDB-GENE-030131-8110]

Gene Synonyms

fj53b07, wu:fj53b07

Location

Chromosome 16: 43,022,580-43,025,887 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 286 variant alleles and maps to 29 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000097528.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156820.3	si:dkey-7j14.5-202	2007	204aa	ENSDARP00000128310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189080.1	si:dkey-7j14.5-204	1252	181aa	ENSDARP00000155376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEQ6	-
ENSDART00000193146.1	si:dkey-7j14.5-205	1067	204aa	ENSDARP00000156374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDL1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157302.2	si:dkey-7j14.5-203	999	181aa	ENSDARP00000128707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEQ6	-
ENSDART00000153783.2	si:dkey-7j14.5-201	780	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 780 bps,

Version

ENSDART00000153783.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000153783.2 si:dkey-7j14.5-201

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Transcript: ENSDART00000153783.2 si:dkey-7j14.5-201

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