Transcript: ENSDART00000153746.3 SH3PXD2A-201

Description

SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]

Location

About this transcript

This transcript has 13 exons, is annotated with 51 domains and features, is associated with 2011 variant alleles and maps to 155 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153746.3	SH3PXD2A-201	6887	1085aa	ENSDARP00000127586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000084457.5	SH3PXD2A-202	3207	1068aa	ENSDARP00000078892.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	T1ECT1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 6,887 bps, Translation length: 1,085 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153746.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.