Transcript: ENSDART00000153739.2 nlk1-202

Description

nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]

Location

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 401 variant alleles and maps to 77 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109790.5	nlk1-201	3713	475aa	ENSDARP00000100637.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6Q382	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153739.2	nlk1-202	2318	384aa	ENSDARP00000129722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000184418.1	nlk1-203	994	329aa	ENSDARP00000150666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,318 bps, Translation length: 384 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153739.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.