Transcript: ENSDART00000153689.2 ppt2a.5-201

Description

palmitoyl-protein thioesterase 2a, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-131125-23]

Gene Synonyms

si:ch73-95l15.3

Location

About this transcript

This transcript has 6 exons, is associated with 210 variant alleles and maps to 58 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165210.2	ppt2a.5-203	1660	291aa	ENSDARP00000130939.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T1Z2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155368.3	ppt2a.5-202	1238	291aa	ENSDARP00000128868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T1Z2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153689.2	ppt2a.5-201	846	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 846 bps,

Version

ENSDART00000153689.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.