Transcript: ENSDART00000153633.2 igf2bp1-202

Description

insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]

Gene Synonyms

fb96d05, wu:fb18f03, wu:fb96d05, wu:fi72a06, zgc:152963

Location

Chromosome 3: 23,541,377-23,574,643 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 164 variant alleles and maps to 30 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061478.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000087726.7	igf2bp1-201	8478	598aa	ENSDARP00000082159.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4J1A6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000176012.2	igf2bp1-204	1912	598aa	ENSDARP00000143837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4J1A6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155282.2	igf2bp1-203	747	112aa	ENSDARP00000127796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000153633.2	igf2bp1-202	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 666 bps,

Version

ENSDART00000153633.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000153633.2 igf2bp1-202

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Transcript: ENSDART00000153633.2 igf2bp1-202

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