Transcript: ENSDART00000153625.2 nfybb-202

Description

nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]

Gene Synonyms

nfyb, zgc:110533

Location

Chromosome 25: 28,825,657-28,846,336 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 936 variant alleles and maps to 93 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000045611.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000067072.6	nfybb-201	1344	226aa	ENSDARP00000067071.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P9N2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000153625.2	nfybb-202	740	228aa	ENSDARP00000127511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WBC0	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 740 bps, Translation length: 228 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153625.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153625.2 nfybb-202

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Transcript: ENSDART00000153625.2 nfybb-202

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