Transcript: ENSDART00000153614.4 si:dkey-187j14.6-201

Description

si:dkey-187j14.6 [Source:ZFIN;Acc:ZDB-GENE-131121-572]

Location

Chromosome 7: 2,214,348-2,285,314 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 1890 variant alleles and maps to 158 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000087424.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000153614.4	si:dkey-187j14.6-201	1320	329aa	ENSDARP00000142319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000182211.1	si:dkey-187j14.6-203	1769	250aa	ENSDARP00000156463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000156781.2	si:dkey-187j14.6-202	630	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,320 bps, Translation length: 329 residues

Version

ENSDART00000153614.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153614.4 si:dkey-187j14.6-201

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Transcript: ENSDART00000153614.4 si:dkey-187j14.6-201

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