Transcript: ENSDART00000153562.3 ppfia3-202

Description

PTPRF interacting protein alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]

Location

About this transcript

This transcript has 32 exons, is annotated with 48 domains and features, is associated with 1518 variant alleles and maps to 63 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153562.3	ppfia3-202	4778	1226aa	ENSDARP00000127938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WCJ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000109953.4	ppfia3-201	1845	614aa	ENSDARP00000098951.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F905	-
ENSDART00000189583.1	ppfia3-203	741	246aa	ENSDARP00000147975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q4I6	-

Summary

Statistics

Exons: 32, Coding exons: 30, Transcript length: 4,778 bps, Translation length: 1,226 residues

Version

ENSDART00000153562.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.