Transcript: ENSDART00000153502.3 TMEM199-201

Description

transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]

Gene Synonyms

zgc:109974

Location

Chromosome 15: 24,673,283-24,676,211 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 301 variant alleles and maps to 219 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000069314.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000100756.5	TMEM199-202	435	144aa	ENSDARP00000091529.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000153502.3	TMEM199-201	863	138aa	ENSDARP00000129123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 863 bps, Translation length: 138 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153502.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153502.3 TMEM199-201

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Transcript: ENSDART00000153502.3 TMEM199-201

Summary

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