Transcript: ENSDART00000153452.2 hsp90ab1-203

Description

heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-031001-3]

Gene Synonyms

cb820, hsp90a.2, hsp90a2, hsp90b, hsp90beta, wu:fa29f01, wu:fa91e11, wu:fd59e11, wu:gcd22h07

Location

Chromosome 20: 51,201,818-51,202,809 forward strand.

About this transcript

This transcript has 2 exons, is associated with 247 variant alleles and maps to 8 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000029150.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020084.10	hsp90ab1-201	3386	725aa	ENSDARP00000014978.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O57521	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169321.3	hsp90ab1-204	4561	725aa	ENSDARP00000137112.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ISA3 O57521	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130572.3	hsp90ab1-202	641	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000153452.2	hsp90ab1-203	511	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 511 bps,

Version

ENSDART00000153452.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153452.2 hsp90ab1-203

Summary

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Transcript: ENSDART00000153452.2 hsp90ab1-203

Summary

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