Transcript: ENSDART00000153386.2 slc10a4-202

Description

solute carrier family 10 member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]

Gene Synonyms

si:dkey-90m5.5

Location

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 231 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000022887.9	slc10a4-201	1577	417aa	ENSDARP00000019940.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RHE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153386.2	slc10a4-202	611	204aa	ENSDARP00000127118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JA53	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 611 bps, Translation length: 204 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000153386.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.