Transcript: ENSDART00000153368.2 bub1ba-204

Description

BUB1 mitotic checkpoint serine/threonine kinase Ba [Source:ZFIN;Acc:ZDB-GENE-041014-120]

Gene Synonyms

fi15g07, si:ch211-158b22.2, wu:fi15g07

Location

Chromosome 20: 53,484,299-53,495,286 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 494 variant alleles and maps to 29 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078825.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114313.5	bub1ba-201	2169	722aa	ENSDARP00000101544.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q636	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000138976.4	bub1ba-202	2394	721aa	ENSDARP00000116981.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RA38	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000153368.2	bub1ba-204	404	135aa	ENSDARP00000127429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000152902.2	bub1ba-203	861	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 404 bps, Translation length: 135 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000153368.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000153368.2 bub1ba-204

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Transcript: ENSDART00000153368.2 bub1ba-204

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