Transcript: ENSDART00000153351.3 fntb-203

Description

farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]

Gene Synonyms

wu:fb99h09, zgc:86774

Location

Chromosome 20: 28,803,977-28,815,260 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 394 variant alleles and maps to 36 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000027916.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000038149.6	fntb-201	1665	419aa	ENSDARP00000034563.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IQG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000188526.1	fntb-204	1762	449aa	ENSDARP00000150616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QF89	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000153351.3	fntb-203	574	134aa	ENSDARP00000127398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAX7	-
ENSDART00000153046.2	fntb-202	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 574 bps, Translation length: 134 residues

Version

ENSDART00000153351.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153351.3 fntb-203

Summary

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Transcript: ENSDART00000153351.3 fntb-203

Summary

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