Transcript: ENSDART00000153333.3 ppm1bb-203

Description

protein phosphatase, Mg2+/Mn2+ dependent, 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-185]

Gene Synonyms

fc18g04, ppm1a, wu:fc18g04, zgc:92329

Location

Chromosome 12: 25,432,626-25,473,206 forward strand.

About this transcript

This transcript has 4 exons, is associated with 556 variant alleles and maps to 76 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000011496.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011662.6	ppm1bb-201	3617	382aa	ENSDARP00000011459.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U386	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186406.1	ppm1bb-204	5124	382aa	ENSDARP00000148116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U386	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153253.2	ppm1bb-202	877	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000153333.3	ppm1bb-203	1771	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,771 bps,

Version

ENSDART00000153333.3

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000153333.3 ppm1bb-203

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000153333.3 ppm1bb-203

Summary

About Us

Get help

Our sister sites

Follow us