Transcript: ENSDART00000153327.2 foxj1b-202

Description

forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]

Location

About this transcript

This transcript has 2 exons, is annotated with 11 domains and features, is associated with 107 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126676.2	foxj1b-201	2316	442aa	ENSDARP00000107064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8Z9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181942.1	foxj1b-203	1343	442aa	ENSDARP00000145705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8Z9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153327.2	foxj1b-202	828	184aa	ENSDARP00000127381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 828 bps, Translation length: 184 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000153327.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.