Transcript: ENSDART00000153324.2 rmdn3-202

Description

regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]

Gene Synonyms

fam82a2, fam82c, si:dkey-199i12.5

Location

About this transcript

This transcript has 5 exons, is associated with 397 variant alleles and maps to 46 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000060702.7	rmdn3-201	1825	476aa	ENSDARP00000060701.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153324.2	rmdn3-202	477	100aa	ENSDARP00000127432.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 477 bps, Translation length: 100 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153324.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.