Transcript: ENSDART00000153304.2 matn3a-205

Description

matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]

Gene Synonyms

ns:zf-e359, si:dkeyp-50f7.4, zgc:101120

Location

Chromosome 20: 43,763,916-43,771,871 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 30 domains and features, is associated with 574 variant alleles and maps to 107 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000069245.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148809.3	matn3a-203	1954	337aa	ENSDARP00000125091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q68EK6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000149001.3	matn3a-204	1974	295aa	ENSDARP00000124655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH94	-
ENSDART00000100608.6	matn3a-201	1463	460aa	ENSDARP00000091381.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH95	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000100610.5	matn3a-202	1414	460aa	ENSDARP00000091383.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH95	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153304.2	matn3a-205	740	247aa	ENSDARP00000127244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAH6	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 740 bps, Translation length: 247 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000153304.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153304.2 matn3a-205

Summary

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Transcript: ENSDART00000153304.2 matn3a-205

Summary

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