Transcript: ENSDART00000153260.2 si:ch211-141o9.10-202

Description

si:ch211-141o9.10 [Source:ZFIN;Acc:ZDB-GENE-130603-5]

Gene Synonyms

zmp:0000000832

Location

Chromosome 12: 19,275,387-19,282,120 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 263 variant alleles and maps to 174 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077900.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186669.1	si:ch211-141o9.10-204	3509	296aa	ENSDARP00000145097.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBZ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153260.2	si:ch211-141o9.10-202	1348	296aa	ENSDARP00000127440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBZ9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153414.2	si:ch211-141o9.10-203	866	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000152832.2	si:ch211-141o9.10-201	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,348 bps, Translation length: 296 residues

Version

ENSDART00000153260.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153260.2 si:ch211-141o9.10-202

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Transcript: ENSDART00000153260.2 si:ch211-141o9.10-202

Summary

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