Transcript: ENSDART00000153255.2 parla-204

Description

presenilin associated, rhomboid-like a [Source:NCBI gene;Acc:541485]

Gene Synonyms

parlb, zgc:112986

Location

About this transcript

This transcript has 5 exons, is associated with 278 variant alleles and maps to 44 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057439.5	parla-201	1613	383aa	ENSDARP00000057438.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JLG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137882.2	parla-202	889	59aa	ENSDARP00000112696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JLG7	-
ENSDART00000153255.2	parla-204	810	100aa	ENSDARP00000127426.1	Nonsense mediated decay	U3JB04	-
ENSDART00000144640.2	parla-203	773	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 810 bps, Translation length: 100 residues

Version

ENSDART00000153255.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.