Transcript: ENSDART00000153227.2 nfe2l1b-203

Description

nfe2 like bZIP transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]

Location

About this transcript

This transcript has 2 exons, is associated with 128 variant alleles and maps to 22 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152969.2	nfe2l1b-201	643	214aa	ENSDARP00000127352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000152991.3	nfe2l1b-202	5275	721aa	ENSDARP00000127336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAR7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153227.2	nfe2l1b-203	502	16aa	ENSDARP00000127206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 502 bps, Translation length: 16 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000153227.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.