Transcript: ENSDART00000153220.2 VASH2-203

Description

vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]

Location

Chromosome 20: 37,866,861-37,896,526 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 1060 variant alleles and maps to 56 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007774.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153190.3	VASH2-201	5295	348aa	ENSDARP00000127404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGT1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000036546.5	VASH2-204	1047	348aa	ENSDARP00000035163.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGT1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153220.2	VASH2-203	905	256aa	ENSDARP00000127224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000153051.2	VASH2-202	699	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 905 bps, Translation length: 256 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153220.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153220.2 VASH2-203

Summary

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Transcript: ENSDART00000153220.2 VASH2-203

Summary

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