Transcript: ENSDART00000153195.2 svila-207

Description

supervillin a [Source:NCBI gene (formerly Entrezgene);Acc:30112]

Location

Chromosome 12: 23,923,325-23,932,015 forward strand.

About this transcript

This transcript has 5 exons, is associated with 262 variant alleles and maps to 87 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055075.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000188652.1	svila-208	8812	1763aa	ENSDARP00000149385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6K8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000192478.1	svila-209	8791	1756aa	ENSDARP00000145862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000066331.7	svila-201	6407	1763aa	ENSDARP00000066330.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6K8	-
ENSDART00000152864.3	svila-203	2851	695aa	ENSDARP00000127446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000152921.2	svila-205	896	111aa	ENSDARP00000127170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152869.2	svila-204	553	184aa	ENSDARP00000127101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000152852.2	svila-202	511	170aa	ENSDARP00000127378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000153195.2	svila-207	750	136aa	ENSDARP00000127354.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000152997.3	svila-206	378	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 750 bps, Translation length: 136 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153195.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153195.2 svila-207

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Transcript: ENSDART00000153195.2 svila-207

Summary

About Us

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