Transcript: ENSDART00000153193.3 sash1a-204

Description

SAM and SH3 domain containing 1a [Source:NCBI gene (formerly Entrezgene);Acc:557132]

Location

Chromosome 20: 31,452,157-31,496,687 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 4 domains and features, is associated with 1115 variant alleles and maps to 47 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007179.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000046841.9	sash1a-201	7137	1192aa	ENSDARP00000046840.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZ33	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137679.4	sash1a-203	3742	876aa	ENSDARP00000125862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000153193.3	sash1a-204	780	200aa	ENSDARP00000127293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153437.2	sash1a-205	718	182aa	ENSDARP00000127229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000087405.6	sash1a-202	495	164aa	ENSDARP00000081839.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 780 bps, Translation length: 200 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000153193.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153193.3 sash1a-204

Summary

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Transcript: ENSDART00000153193.3 sash1a-204

Summary

About Us

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