Transcript: ENSDART00000153187.2 thrab-201

Description

thyroid hormone receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-060613-1]

Gene Synonyms

NR1A1-B, c-erbA, nr1a1b

Location

About this transcript

This transcript has 10 exons, is annotated with 38 domains and features, is associated with 3002 variant alleles and maps to 290 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153187.2	thrab-201	1831	409aa	ENSDARP00000127358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000179553.2	thrab-202	1212	403aa	ENSDARP00000143264.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y807	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 1,831 bps, Translation length: 409 residues

Version

ENSDART00000153187.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

non-submitted evidence [Definitions]